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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858350.1_cds_XP_016513850.1_26351
CDS Infomation

[gene=LOC107830733] [db_xref=GeneID:107830733] [protein=photosystem II stability/assembly factor HCF136, chloroplastic-like] [protein_id=XP_016513850.1] [location=join(128970..129288,130046..130281,132950..133080,133694..133826,134015..134137,135096..135170,135650..135765,135882..135948)] [gbkey=CDS]
Sequence

ATGGCATGTTCTTGCTGGAACTCCATTTTCACTCCTCTCAAACCTACTTATAACACCATT
TCTTCTGCTGCTGCTTCGCCTCATCACCATCAGCTTCCTCGGTTGGTACCAAGAGCATCA
TCTAGTATTAATCGCAGGCAGTTAATCGCTGAGACTGCTGCTGCCATTGCACTACCGCCA
TTGCTCGGAGCCGGAATCTCACCTATCCCTGCTAAAGCTGACGAGGTGCCTCTCTCTGAA
TGGGAAAGAGTTTATCTTCCTATTGACCCTGGTGTCGTCCTTCTCGACATTGCCTTCGTT
CCCGATGACCCCACTCACGGTTTTCTACTGGGGACCAGGCAAACTATTTTGGAAACAAAG
GATGGAGGAACTACTTGGGCATCAAGATCTATAGCTTCTGCCGAAGAGGAAGATTTCAAT
TATAGGTTTAATTCTATCAGTTTCAAAGGCAAGGAAGGGTGGATTATTGGAAAACCAGCA
ATCTTGTTGTATACTTCCGATGCTGGTGAAACCTGGCAGCGGATACCCTTGAGTTCTCAA
CTTCCTGGTGATATGGTTTATATCAAGGCAACTGGAGAAAAAAGTGCAGAAATGGTAACT
GACGAAGGTGCAATATATGTTACATCGAACAAGGGATACAACTGGAAGGCTGCTATACAA
GAAACTGTGTCCGCTACCCTTAATAGAACAGTTTCTAGTGGCATTAGTGGTGCCAGTTAC
TATACAGGCACTTTCAGTACTGTTAATCGCTCTCCTGATGGACGTTATGTAGCAGTTTCA
AGCCGTGGTAACTTCTATTTGACCTGGGAGCCAGGGCAGGCGTACTGGCAACCGCATAAC
AGAGCTGTGGCTAGAAGAATCCAAAACATGGGCTGGAGGGCTGATGGTGGTCTTTGGCTA
CTTGTGCGTGGTGGAGGGCTATACCTCAGCAAGGGCACAGGGTTATCAGAGGACTTTGAA
GAAGTTTCTGTACAAAGCCGTGGTTTTGGCATTCTTGATGTCGGCTACCGCTCACAGGAT
GAGGCATGGGCTGCTGGTGGAAGTGGGATTTTATTGAAGACCAAAAATGGCGGCAAGACA
TGGATTCGTGACAAAGCAGCTGATAATATTGCTGCGAATCTTTATTCGGTGAAGTTTATC
AATGACAACCAGGGATTTGTACTGGGTAATGATGGTGTTTTACTCAAGTATCTTGGATAG

Peptide Sequence

PEP ID

XP_016513850.1
PEP Infomation

PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic-like [Nicotiana tabacum]
Sequence

MACSCWNSIFTPLKPTYNTISSAAASPHHHQLPRLVPRASSSINRRQLIAETAAAIALPP
LLGAGISPIPAKADEVPLSEWERVYLPIDPGVVLLDIAFVPDDPTHGFLLGTRQTILETK
DGGTTWASRSIASAEEEDFNYRFNSISFKGKEGWIIGKPAILLYTSDAGETWQRIPLSSQ
LPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAIQETVSATLNRTVSSGISGASY
YTGTFSTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQPHNRAVARRIQNMGWRADGGLWL
LVRGGGLYLSKGTGLSEDFEEVSVQSRGFGILDVGYRSQDEAWAAGGSGILLKTKNGGKT
WIRDKAADNIAANLYSVKFINDNQGFVLGNDGVLLKYLG

Transcript Sequence

Gene sequence data has not been registered.